8T1M
Novel Domain of Unknown Function Solved with AlphaFold
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-31 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.110, 70.820, 94.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.250 - 3.000 |
R-factor | 0.2795 |
Rwork | 0.274 |
R-free | 0.33300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8t0b |
RMSD bond length | 0.011 |
RMSD bond angle | 1.444 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.250 | 47.250 | 3.080 |
High resolution limit [Å] | 3.000 | 13.410 | 3.000 |
Rmerge | 0.226 | 0.052 | 1.121 |
Rmeas | 0.272 | 0.068 | 1.363 |
Number of reflections | 5084 | 63 | 381 |
<I/σ(I)> | 4.38 | ||
Completeness [%] | 87.9 | ||
Redundancy | 2.74 | ||
CC(1/2) | 0.972 | 0.995 | 0.299 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 100mM Tris HCl pH 8.5, 150mM magnesium chloride, 12.5% PEG 8000 |