8T0T
Structure of Compound 4 bound to human ALDH1A1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-15 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.98 |
Spacegroup name | P 4 2 2 |
Unit cell lengths | 109.236, 109.236, 83.245 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.030 - 1.750 |
R-factor | 0.2006 |
Rwork | 0.198 |
R-free | 0.24030 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.943 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.780 |
High resolution limit [Å] | 1.750 | 4.750 | 1.750 |
Rmerge | 0.037 | 0.653 | |
Rmeas | 0.075 | 0.040 | 0.706 |
Rpim | 0.025 | 0.013 | 0.264 |
Number of reflections | 51200 | 2765 | 2520 |
<I/σ(I)> | 15.2 | ||
Completeness [%] | 99.9 | 98.6 | 99.6 |
Redundancy | 9.2 | 8.7 | 7 |
CC(1/2) | 0.999 | 0.787 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.4 | 298 | 10% PEG 3350, 100 mM Bis-Tris, 200 mM NaCl, 10 mM YbCl3 |