8T0J
Salmonella Typhimurium ArnD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9791 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 82.551, 85.646, 111.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.740 - 2.590 |
R-factor | 0.2284 |
Rwork | 0.225 |
R-free | 0.28730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.970 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.740 | 2.683 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.082 | 0.234 |
Rmeas | 0.101 | 0.292 |
Rpim | 0.059 | 0.172 |
Number of reflections | 11633 | 861 |
<I/σ(I)> | 12.82 | 3.99 |
Completeness [%] | 91.4 | 70.43 |
Redundancy | 2.7 | 2.5 |
CC(1/2) | 0.995 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | Crystals of ArnD were obtained by mixing 2 uL of a stock solution of ArnD (6 mg/mL) in 25mM Tris-HCl, pH8.0, 150mM NaCl, 10% glycerol, 5mM BME, 0.0174% DDM, with 2 uL of a precipitant solution containing 0.1M Na citrate pH 6.2, 10% isopropanol and 17% PEG4000 and allowing vapor diffusion between the protein droplet and a 1mL reservoir of precipitant in a hanging drop set up incubated at 16 degrees Celsius. |