8SZU
Structure of Kdac1-Citarinostat complex from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 80.594, 80.594, 204.645 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.730 - 1.750 |
R-factor | 0.1847 |
Rwork | 0.183 |
R-free | 0.21130 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.949 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.730 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Number of reflections | 783129 | 67310 |
<I/σ(I)> | 16.9 | 4.6 |
Completeness [%] | 100.0 | |
Redundancy | 11.4 | |
CC(1/2) | 0.980 | 0.818 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 10mg/mL Kdac1 0.2 M magnesium chloride hexahydrate and 20% PEG 3,350 (w/v) seeded |