8SZS
Cat DHX9 bound to GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 86.110, 86.110, 347.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.030 - 2.380 |
Rwork | 0.218 |
R-free | 0.26460 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.792 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.030 | 2.450 |
High resolution limit [Å] | 2.380 | 2.380 |
Rmerge | 0.144 | 1.542 |
Rmeas | 0.147 | 1.575 |
Rpim | 0.029 | 0.317 |
Total number of observations | 1403168 | 110689 |
Number of reflections | 53722 | 4579 |
<I/σ(I)> | 17.4 | 2.4 |
Completeness [%] | 100.0 | |
Redundancy | 26.1 | 24.2 |
CC(1/2) | 0.999 | 0.834 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.2 | 291 | 0.15 M ammonium sulfate, 0.1 M Tris, pH 8.2, 15% w/v PEG4000; 5 mM GDP and 50 mM magnesium chloride in protein solution |