8SXS
Crystal structure of a Nudix hydrolase effector from Magnaporthe oryzae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.188, 60.545, 62.492 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.970 - 1.570 |
R-factor | 0.1577 |
Rwork | 0.156 |
R-free | 0.19580 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.018 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.500 | 1.620 |
High resolution limit [Å] | 1.570 | 1.570 |
Rmerge | 0.047 | 0.213 |
Rmeas | 0.051 | 0.232 |
Rpim | 0.020 | 0.089 |
Number of reflections | 32124 | 3049 |
<I/σ(I)> | 22.35 | 5.9 |
Completeness [%] | 99.6 | 96.5 |
Redundancy | 6.6 | 6.6 |
CC(1/2) | 0.999 | 0.979 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 200 mM Potassium thiocyanate 20% w/v PEG 3350 |