Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8STP

Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)indolizine-2-carbonitrile (JLJ555), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]80
Detector technologyCCD
Collection date2013-03-29
DetectorADSC QUANTUM 315
Wavelength(s)1.075
Spacegroup nameC 1 2 1
Unit cell lengths223.731, 68.798, 105.207
Unit cell angles90.00, 105.66, 90.00
Refinement procedure
Resolution35.900 - 3.090
R-factor0.218
Rwork0.215
R-free0.25170
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.451
Data reduction softwareHKL-2000
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.130
High resolution limit [Å]3.0808.3503.080
Rmerge0.0840.0450.521
Total number of observations106127
Number of reflections2840713601399
<I/σ(I)>13.3
Completeness [%]99.590.9100
Redundancy3.73.53.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.527750 mM HEPES pH 7.5, 12% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon