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8SSM

Citrobacter rodentium contact dependent growth inhibition (CDI) toxin (CdiA-CT) and immunity (CdiI) complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]110
Detector technologyPIXEL
Collection date2022-06-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths79.349, 114.410, 114.639
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.050 - 2.480
R-factor0.1918
Rwork0.187
R-free0.23670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8SSK + AlphaFold model
RMSD bond length0.002
RMSD bond angle0.533
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.0502.530
High resolution limit [Å]2.4802.480
Rmerge0.1050.805
Rmeas0.1240.948
Rpim0.0660.496
Number of reflections188682119
<I/σ(I)>13.12.3
Completeness [%]100.0100
Redundancy6.66.9
CC(1/2)0.9970.736
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52770.1 M Tris, pH 8.5, 0.2 M sodium chloride, 25% PEG3350

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