8SPJ
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) N28T Mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.846, 53.497, 45.292 |
Unit cell angles | 90.00, 101.82, 90.00 |
Refinement procedure
Resolution | 38.680 - 2.080 |
R-factor | 0.21816 |
Rwork | 0.217 |
R-free | 0.24184 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.972 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.130 |
High resolution limit [Å] | 2.080 | 2.080 |
Rmerge | 0.104 | 0.543 |
Number of reflections | 15680 | 775 |
<I/σ(I)> | 22.15 | 2.13 |
Completeness [%] | 98.5 | 96.5 |
Redundancy | 5.8 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 25% PEG 3350, 0.1M Potassium/Sodium Tartrate, 0.005M Magnesium Chloride |