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8SPI

Crystal structure of chimeric omicron RBD (strain XBB.1.5) complexed with human ACE2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-08
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979
Spacegroup nameP 1 21 1
Unit cell lengths78.365, 116.205, 108.767
Unit cell angles90.00, 96.60, 90.00
Refinement procedure
Resolution77.850 - 3.060
R-factor0.1927
Rwork0.190
R-free0.24350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ajf
RMSD bond length0.003
RMSD bond angle0.476
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]108.0453.368
High resolution limit [Å]3.0563.056
Rmerge0.1210.881
Number of reflections248131241
<I/σ(I)>6.81.6
Completeness [%]86.8
Redundancy3.9
CC(1/2)0.7410.653
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.2298100 mM Tris, pH 8.2, 24% PEG6000, 150 mM sodium chloride, 10% ethylene glycol

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