8SD5
Crystal structure of HPPK from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-27 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.729, 75.744, 179.578 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.930 - 2.802 |
R-factor | 0.2447 |
Rwork | 0.243 |
R-free | 0.29000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.123 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3352)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.900 |
High resolution limit [Å] | 2.800 | 6.020 | 2.800 |
Rmerge | 0.072 | 0.032 | 0.326 |
Rmeas | 0.081 | 0.035 | 0.411 |
Rpim | 0.037 | 0.014 | 0.245 |
Number of reflections | 22509 | 2676 | 1601 |
<I/σ(I)> | 9.1 | ||
Completeness [%] | 88.3 | 97.7 | 64.1 |
Redundancy | 3.8 | 5.8 | 1.8 |
CC(1/2) | 1.000 | 0.587 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | Lithium sulphate, PEG1000 |