Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8S8T

KOD-H4 DNA polymerase mutant in a binary complex with DNA/DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000010
Spacegroup nameP 21 21 2
Unit cell lengths111.552, 149.297, 66.216
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.450 - 3.000
R-factor0.1873
Rwork0.185
R-free0.24240
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.629
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5202.390
High resolution limit [Å]2.2502.250
Number of reflections10043816062
<I/σ(I)>3.95
Completeness [%]99.1
Redundancy3.17
CC(1/2)0.9890.115
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29110% (w/v) Polyethylene glycol 8,000, 100 mM TRIS; pH 8.0 10% (v/v) Glycerol, 1 mM Tris(2-carboxyethyl)phosphine hydrochloride

242500

PDB entries from 2025-10-01

PDB statisticsPDBj update infoContact PDBjnumon