8S79
Lotus japonicus NFR5 intracellular domain in complex with Nanobody 200
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 126.755, 126.755, 137.875 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.490 - 2.290 |
R-factor | 0.1976 |
Rwork | 0.196 |
R-free | 0.23050 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.673 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.660 | 2.580 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmeas | 0.091 | 1.486 |
Number of reflections | 32844 | 1642 |
<I/σ(I)> | 16.8 | 7.11 |
Completeness [%] | 56.4 | |
Redundancy | 9.8 | 9 |
CC(1/2) | 0.999 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292.15 | 0.1 M sodium cacodylate pH 6.5, 1.2 M sodium acetate |