8S6M
SARS-CoV-2 BQ.1.1 RBD bound to the S2V29 and the S2H97 Fab fragments
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2023-03-25 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 148.175, 48.099, 166.526 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.350 - 1.670 |
R-factor | 0.1849 |
Rwork | 0.184 |
R-free | 0.20270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.858 |
Data reduction software | XDS (Jan 10, 2022) |
Data scaling software | Aimless (0.7.9) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.350 | 1.730 |
High resolution limit [Å] | 1.670 | 1.670 |
Rmerge | 0.065 | |
Number of reflections | 138934 | 13733 |
<I/σ(I)> | 15.5 | 0.7 |
Completeness [%] | 100.0 | |
Redundancy | 6.8 | |
CC(1/2) | 0.999 | 0.360 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M Tris pH 8.5, 20% PEG-MME 2000, and 10 mM NiCl2 |