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8S6M

SARS-CoV-2 BQ.1.1 RBD bound to the S2V29 and the S2H97 Fab fragments

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]293
Detector technologyPIXEL
Collection date2023-03-25
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths148.175, 48.099, 166.526
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.350 - 1.670
R-factor0.1849
Rwork0.184
R-free0.20270
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.858
Data reduction softwareXDS (Jan 10, 2022)
Data scaling softwareAimless (0.7.9)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.3501.730
High resolution limit [Å]1.6701.670
Rmerge0.065
Number of reflections13893413733
<I/σ(I)>15.50.7
Completeness [%]100.0
Redundancy6.8
CC(1/2)0.9990.360
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1 M Tris pH 8.5, 20% PEG-MME 2000, and 10 mM NiCl2

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PDB entries from 2025-06-11

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