Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8S6K

Crystal structure of ScFv-G2D11 complexed to a bis-Tn glycopeptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-09
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9999
Spacegroup nameP 1 21 1
Unit cell lengths45.992, 69.667, 87.367
Unit cell angles90.00, 102.99, 90.00
Refinement procedure
Resolution19.900 - 1.750
R-factor0.18396
Rwork0.182
R-free0.22142
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.945
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.840
High resolution limit [Å]1.7501.750
Rmerge0.0850.489
Number of reflections522876651
<I/σ(I)>7.31.7
Completeness [%]96.584.6
Redundancy3.5
CC(1/2)0.9960.778
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8291lithium chloride Tris PEG 8000

237992

PDB entries from 2025-06-25

PDB statisticsPDBj update infoContact PDBjnumon