8S69
Low pH (5.5) as-isolated MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [22.8 MGy]
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.855 |
Spacegroup name | P 63 |
Unit cell lengths | 104.290, 104.290, 64.790 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.199 - 1.780 |
Rwork | 0.156 |
R-free | 0.19280 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.666 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.650 | 1.820 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmerge | 0.137 | 1.316 |
Rmeas | 0.170 | 1.637 |
Rpim | 0.099 | 0.948 |
Number of reflections | 38372 | 2165 |
<I/σ(I)> | 8.5 | |
Completeness [%] | 99.6 | |
Redundancy | 4.9 | 5 |
CC(1/2) | 0.994 | 0.314 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 50 mM Hepes pH 5.5, 1.8 M Ammonium Sulphate |