8S4E
Dimeric Alpha-beta barrel protein from Brassica rapa subsp.pekinensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2023-11-25 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97630 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 92.370, 92.370, 70.860 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.100 - 1.980 |
R-factor | 0.17237 |
Rwork | 0.170 |
R-free | 0.20683 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.819 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.100 | 2.030 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.140 | 1.580 |
Rpim | 0.150 | 0.970 |
Number of reflections | 24712 | 1696 |
<I/σ(I)> | 13.8 | 1.4 |
Completeness [%] | 100.0 | |
Redundancy | 20.4 | |
CC(1/2) | 1.000 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 500 mM Bis-tris propane pH 6.5; 40% (w/v) PEG 3350; 500 mM NaI |