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8S4E

Dimeric Alpha-beta barrel protein from Brassica rapa subsp.pekinensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]120
Detector technologyPIXEL
Collection date2023-11-25
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97630
Spacegroup nameP 32 2 1
Unit cell lengths92.370, 92.370, 70.860
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution53.100 - 1.980
R-factor0.17237
Rwork0.170
R-free0.20683
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.819
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]53.1002.030
High resolution limit [Å]1.9801.980
Rmerge0.1401.580
Rpim0.1500.970
Number of reflections247121696
<I/σ(I)>13.81.4
Completeness [%]100.0
Redundancy20.4
CC(1/2)1.0000.830
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5298500 mM Bis-tris propane pH 6.5; 40% (w/v) PEG 3350; 500 mM NaI

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PDB entries from 2025-08-06

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