8S1Z
Crystal structure of glycosylated human primary amine oxidase AOC3
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.918401 |
Spacegroup name | P 43 |
Unit cell lengths | 127.959, 127.959, 220.361 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.880 - 3.800 |
R-factor | 0.2875 |
Rwork | 0.286 |
R-free | 0.31990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.237 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.880 | 3.900 |
High resolution limit [Å] | 3.800 | 3.800 |
Number of reflections | 54606 | 3455 |
<I/σ(I)> | 1.68 | |
Completeness [%] | 87.4 | |
Redundancy | 4 | |
CC(1/2) | 0.879 | 0.120 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 0.2 M Sodium Chloride, 0.1 M Sodium Acetate pH 5.0, 20% PEG 6000 |