8RSO
Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the ground state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-01 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 |
Unit cell lengths | 40.710, 55.850, 56.640 |
Unit cell angles | 64.09, 81.52, 85.29 |
Refinement procedure
Resolution | 47.230 - 1.250 |
R-factor | 0.1527 |
Rwork | 0.151 |
R-free | 0.17680 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.123 |
Data reduction software | XDS (20220110) |
Data scaling software | STARANISO (2.3.79) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.230 | 47.230 | 1.360 |
High resolution limit [Å] | 1.240 | 3.700 | 1.240 |
Rpim | 0.037 | 0.031 | 0.670 |
Number of reflections | 92902 | 4644 | 4644 |
<I/σ(I)> | 9.6 | 23.7 | 1.3 |
Completeness [%] | 86.6 | 98.4 | 35.3 |
Redundancy | 3.6 | 3.6 | 2.5 |
CC(1/2) | 0.996 | 0.994 | 0.352 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 8.8 | 293 | 3.0 M Ammonium Phosphate buffer, pH 8.8 |