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8RMH

Crystal structure of parallel G-quadruplex containing T-tetrads and TG-octaplet

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I23
Synchrotron siteDiamond
BeamlineI23
Temperature [K]293.15
Detector technologyPIXEL
Collection date2023-09-18
DetectorDECTRIS PILATUS 12M
Wavelength(s)1.1271
Spacegroup nameP 4 21 2
Unit cell lengths40.436, 40.436, 40.479
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.480 - 1.150
R-factor0.1536
Rwork0.151
R-free0.19000
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.277
Data reduction softwareDIALS
Data scaling softwareXSCALE
Phasing softwareACORN
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.4801.170
High resolution limit [Å]1.1501.150
Number of reflections12480589
<I/σ(I)>0.353
Completeness [%]100.0
Redundancy126.9
CC(1/2)1.0000.567
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.15A solution containing DNA 1.8 mM, 0.02 M Sodium Cacodylate pH 5.5, 0.1 M NaCl, 0.01 mM MgCl2 was mixed 1:1 with a solution containing 0.2 M Potassium chloride, 0.05 M Sodium cacodylate trihydrate pH 5.9, 10% w/v Polyethylene glycol 4000 & 0.01 M Magnesium chloride hexahydrate.

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