8RKF
Crystal structure of the ZP-N1 and ZP-N2 domains of human ZP2 (hZP2-N1N2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.95378 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 86.930, 86.930, 178.680 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.870 - 3.200 |
R-factor | 0.2402 |
Rwork | 0.234 |
R-free | 0.29260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | ZP-N1 domain ensemble from PDB entries 5II6 and D_1292121897 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.692 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.900 | 3.310 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.154 | 3.808 |
Rmeas | 0.163 | 4.018 |
Rpim | 0.052 | 1.275 |
Number of reflections | 13385 | 1296 |
<I/σ(I)> | 11.8 | 0.6 |
Completeness [%] | 99.3 | 99.2 |
Redundancy | 9.7 | 9.8 |
CC(1/2) | 1.000 | 0.340 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 10-30% (v/v) MPD, 0.1 M MES pH 6.0 or 0.1 M Na-HEPES pH 7.5 |