8RJ5
P1-15 T-cell Receptor bound to HLA A*2402-NF9 pMHC complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-28 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 200.439, 200.439, 156.272 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 61.620 - 3.020 |
R-factor | 0.22195 |
Rwork | 0.220 |
R-free | 0.25981 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.408 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.630 | 3.110 |
High resolution limit [Å] | 3.020 | 3.050 |
Rmerge | 0.302 | 4.765 |
Rmeas | 0.309 | 4.876 |
Rpim | 0.067 | 1.030 |
Number of reflections | 71335 | 3413 |
<I/σ(I)> | 7.1 | |
Completeness [%] | 100.0 | |
Redundancy | 21.1 | |
CC(1/2) | 0.997 | 0.274 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | di-Sodium malonate, 0.1M HEPES pH7, 0.1M Poly(acrylic acid sodium salt) 2,100, 30% w/v |