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8RIH

Crystal structure of the Saccharomyces cerevisiae URH1p riboside hydrolase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-22
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.87313
Spacegroup nameP 63
Unit cell lengths140.284, 140.284, 81.343
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution121.490 - 2.740
Rwork0.186
R-free0.22450
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.908
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]121.4902.890
High resolution limit [Å]2.6002.600
Rpim0.1670.988
Number of reflections137637714
<I/σ(I)>5.91.8
Completeness [%]94.181.8
Redundancy12.911.2
CC(1/2)0.9810.570
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5291.15100 mM TrisHCl, 800 mM LiCl, 32% PEG 4000

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PDB entries from 2024-08-07

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