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8RER

Major groove intercalation with Polypyridyl Ruthenium complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2023-09-27
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97623
Spacegroup nameP 41
Unit cell lengths32.676, 32.676, 103.988
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.680 - 1.200
R-factor0.173
Rwork0.172
R-free0.20250
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle2.267
Data reduction softwareDIALS
Data scaling softwarexia2
Phasing softwareSHELXDE
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.6803.260
High resolution limit [Å]1.2001.200
Rmerge0.069
Rmeas0.072
Rpim0.020
Number of reflections339771710
<I/σ(I)>0.828
Completeness [%]100.0
Redundancy13.6
CC(1/2)0.9980.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.86278A solution containing 0.6 mM DNA, 20 mM Sodium Cacodylate pH 5.5, 100 mM NaCl, 10 mM MgCl2 and 1.6 mM [Ru(TAP)2(11-CN-dppz)] was mixed in a 1:1 ratio with a solution containing 80.6 mM KCl, 40 mM Sodium cacodylate trihydrate pH 5.86, 55% -2-Methyl-2,4-pentanediol, 120 mM Spermine tetrahydrochloride.

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