8REN
Crystal structure of reduced ThyX
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-10 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.978565 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 53.683, 116.615, 140.569 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.520 - 2.139 |
| R-factor | 0.2211 |
| Rwork | 0.220 |
| R-free | 0.25120 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.830 |
| Data reduction software | XDS (Feb 5, 2021) |
| Data scaling software | Aimless (0.7.7) |
| Refinement software | BUSTER (2.10.4) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 89.751 | 89.751 | 2.388 |
| High resolution limit [Å] | 2.139 | 7.058 | 2.139 |
| Rmerge | 0.097 | 0.032 | 1.242 |
| Rmeas | 0.104 | 0.035 | 1.323 |
| Rpim | 0.038 | 0.013 | 0.453 |
| Total number of observations | 233504 | 10525 | 12837 |
| Number of reflections | 30639 | 1530 | 1532 |
| <I/σ(I)> | 11.78 | 38.28 | 1.52 |
| Completeness [%] | 93.4 | 99.7 | 78.5 |
| Completeness (spherical) [%] | 61.8 | 99.7 | 11.2 |
| Completeness (ellipsoidal) [%] | 93.4 | 99.7 | 78.5 |
| Redundancy | 7.62 | 6.88 | 8.38 |
| CC(1/2) | 0.999 | 0.999 | 0.653 |
| Anomalous completeness (spherical) | 60.1 | 100.0 | 10.3 |
| Anomalous completeness | 93.0 | 100.0 | 78.5 |
| Anomalous redundancy | 4.1 | 4.1 | 4.5 |
| CC(ano) | -0.022 | -0.046 | 0.027 |
| |DANO|/σ(DANO) | 0.8 | 0.7 | 0.7 |
| Diffraction limits | Principal axes of ellipsoid fitted to diffraction cut-off surface |
| 2.893 Å | 1.000, 1.000, 1.000 |
| 2.428 Å | 0.000, 0.000, 0.000 |
| 2.138 Å | 0.000, 0.000, 0.000 |
| Criteria used in determination of diffraction limits | local <I/sigmaI> ≥ 1.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 292 | 1 uL protein at 5-7 mg/ml in Tris 25 mM pH 8 NaCl 150 mM with 1 ul 42-46% w/v PEG 200 in Tris 0.1M pH 7.5 |






