8R66
Crystal structure of ThsA Macro domain in complex with signaling molecule
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9800 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 140.296, 71.059, 51.960 |
Unit cell angles | 90.00, 96.78, 90.00 |
Refinement procedure
Resolution | 69.660 - 2.230 |
R-factor | 0.1896 |
Rwork | 0.185 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.598 |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | SCALA (7.0.076) |
Phasing software | PHASER (2.8.0) |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.660 | 2.340 |
High resolution limit [Å] | 2.220 | 2.220 |
Rmerge | 0.057 | 0.366 |
Rmeas | 0.065 | 0.454 |
Rpim | 0.025 | 0.198 |
Total number of observations | 159305 | 12844 |
Number of reflections | 24331 | 2906 |
<I/σ(I)> | 14.7 | 2.9 |
Completeness [%] | 97.1 | |
Redundancy | 6.5 | 4.4 |
CC(1/2) | 0.999 | 0.947 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 23.75% PEG 3500, 0.1 M Bis-Tris pH 6.5, 0.19 M ammonium sulfate, 5% glycerol |