8R4N
Crystal structure of neutralizing Fab Eq4.Dp46-3A from equine antivenom bound to short chain three finger alpha-neurotoxin from Dendroaspis polylepis.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-29 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 104.623, 104.623, 216.427 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.200 |
R-factor | 0.2061 |
Rwork | 0.206 |
R-free | 0.22840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.599 |
Data reduction software | xia2.multiplex |
Data scaling software | xia2.multiplex |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.105 | 1.080 |
Rmeas | 0.106 | 1.098 |
Rpim | 0.012 | 0.186 |
Number of reflections | 30760 | 2869 |
<I/σ(I)> | 30.87 | 1.5 |
Completeness [%] | 98.7 | 93.87 |
Redundancy | 20 | |
CC(1/2) | 1.000 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293.15 | 0.1M SPG buffer (pH9.0), 50% PEG1500 |