8R1Q
SARS-CoV-2 Mpro (Omicron, P132H+T169S) in complex with alpha-ketoamide 13b-K
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-19 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.541, 64.032, 103.692 |
Unit cell angles | 90.00, 90.96, 90.00 |
Refinement procedure
Resolution | 41.440 - 1.700 |
R-factor | 0.1958 |
Rwork | 0.194 |
R-free | 0.22300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.040 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.440 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Number of reflections | 64655 | 6414 |
<I/σ(I)> | 10.92 | 1.28 |
Completeness [%] | 98.4 | 98.27 |
Redundancy | 3.5 | 3.6 |
CC(1/2) | 0.998 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296 | PEG3350 25% |