8QVY
Human NDPK-C unliganded
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-26 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 106.230, 115.510, 82.610 |
Unit cell angles | 90.00, 94.32, 90.00 |
Refinement procedure
Resolution | 47.335 - 2.640 |
Rwork | 0.197 |
R-free | 0.24690 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.007 |
RMSD bond angle | 1.470 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.335 | 2.710 |
High resolution limit [Å] | 2.640 | 2.640 |
Rmerge | 0.127 | 2.390 |
Rmeas | 0.137 | 2.571 |
Number of reflections | 28215 | 2137 |
<I/σ(I)> | 9.45 | 0.92 |
Completeness [%] | 96.4 | 98.2 |
Redundancy | 7.3 | 7.4 |
CC(1/2) | 0.992 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 27% glycerol, 7% PEG 8000, 40 mM KH2PO4 |