8QVD

Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), wild type crystal cryoprotected with glycerol

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	DIAMOND BEAMLINE I04
Synchrotron site	Diamond
Beamline	I04
Temperature [K]	100
Detector technology	PIXEL
Collection date	2023-01-27
Detector	DECTRIS EIGER2 X 16M
Wavelength(s)	0.953731
Spacegroup name	P 1 21 1
Unit cell lengths	70.030, 93.780, 93.460
Unit cell angles	90.00, 94.94, 90.00

Refinement procedure

Resolution	49.510 - 3.300
R-factor	0.2443
Rwork	0.239
R-free	0.29650
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.011
RMSD bond angle	1.434
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHENIX
Refinement software	PHENIX ((1.19.2_4158: ???))

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	49.510	3.400
High resolution limit [Å]	3.300	3.300
Rmerge	0.193
Number of reflections	18261	1557
<I/σ(I)>	7.4	1.2
Completeness [%]	99.8	99.6
Redundancy	6.9	7.1
CC(1/2)	0.997	0.637

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	7.5	293	0.1 M HEPES pH 7.5, 12% (w/v) polyethylene glycol 3,350, 5 mM CoCl2, 5 mM CdCl2, 5 mM MgCl2, and 5 mM NiCl2