8QU2
NF-YB/C Heterodimer in Complex with a 16-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-05 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.080, 51.460, 72.550 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.860 - 1.450 |
R-factor | 0.142 |
Rwork | 0.140 |
R-free | 0.17190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.878 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.860 | 1.502 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.053 | 0.746 |
Rmeas | 0.055 | 0.777 |
Rpim | 0.015 | 0.215 |
Number of reflections | 30704 | 3024 |
<I/σ(I)> | 25.42 | 2.89 |
Completeness [%] | 99.9 | 99.83 |
Redundancy | 13.2 | 12.9 |
CC(1/2) | 1.000 | 0.911 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 100 mM Morpheus Buffer system 3 pH 9.0, 30% (v/v) Morpheus Precipitant mix 1, 100 mM Morpheus Carboxylic acids. |