8QT1
Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-04-30 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9188 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 35.949, 73.140, 55.202 |
| Unit cell angles | 90.00, 95.19, 90.00 |
Refinement procedure
| Resolution | 43.950 - 1.550 |
| R-factor | 0.1758 |
| Rwork | 0.175 |
| R-free | 0.19390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.896 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 43.950 | 1.580 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Rmerge | 0.072 | 0.699 |
| Rmeas | 0.077 | 0.757 |
| Rpim | 0.030 | 0.287 |
| Total number of observations | 284055 | |
| Number of reflections | 41295 | 2031 |
| <I/σ(I)> | 14.9 | 3.2 |
| Completeness [%] | 100.0 | |
| Redundancy | 6.9 | 7 |
| CC(1/2) | 0.999 | 0.852 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 25 % (w/v) PEG 3,350 in 0.1 M Tris pH 8.5 |
