8QMW
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex with substitutions R269W, E271R, L273N
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-02 |
Detector | DECTRIS EIGER2 X CdTe 16M |
Wavelength(s) | 0.6888 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 206.010, 106.440, 108.490 |
Unit cell angles | 90.00, 113.09, 90.00 |
Refinement procedure
Resolution | 24.880 - 1.750 |
R-factor | 0.1451 |
Rwork | 0.145 |
R-free | 0.17450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.148 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.880 | 24.880 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.124 | 0.051 | 0.673 |
Rmeas | 0.133 | 0.055 | 0.724 |
Number of reflections | 213396 | 2392 | 15647 |
<I/σ(I)> | 11.11 | ||
Completeness [%] | 98.5 | ||
Redundancy | 7.2 | ||
CC(1/2) | 0.997 | 0.998 | 0.820 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.1 | 289 | Purified enzyme (9 mg/mL) in 25 mM Tricine-NaOH, 75 mM NaCl, pH 8.0 was incubated at 3% (v/v) CO2 in air and 30 degrees C for 1 hour in the presence of 0.35 mM CABP and 5.6 mM MgCl2. The enzyme was then mixed in a 1:1 ratio with 0.2 M BIS-TRIS propane, 20 % (w/v) polyethylene glycol 4000, pH 9.1. Drops were supplemented with 25 % (v/v) PEG200 before flash freezing crystals in lquid nitrogen. |