8QME
Structural characterization of beta-xyloxidase XynB2 from Geobacillus stearothermophilus CECT43
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-18 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 81.121, 97.514, 107.400 |
Unit cell angles | 107.45, 98.48, 106.55 |
Refinement procedure
Resolution | 81.670 - 2.250 |
R-factor | 0.1795 |
Rwork | 0.178 |
R-free | 0.21280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rhh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.554 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 99.080 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.100 | 0.590 |
Rmeas | 0.141 | 0.835 |
Rpim | 0.100 | 0.590 |
Total number of observations | 235632 | 11351 |
Number of reflections | 134250 | 6524 |
<I/σ(I)> | 3.6 | 0.8 |
Completeness [%] | 97.2 | |
Redundancy | 1.8 | 1.7 |
CC(1/2) | 0.984 | 0.558 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | COUNTER-DIFFUSION | 5 | 293 | Sodium Acetate 0.1M pH 5.0, Ammonium Sulphate 2.8M |