8QJN
SmNuc1 nuclease from Stenotrophomonas maltophilia in complex with adenosine-5'-monophosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.470, 72.741, 82.752 |
Unit cell angles | 90.00, 102.68, 90.00 |
Refinement procedure
Resolution | 43.385 - 1.650 |
R-factor | 0.1759 |
Rwork | 0.175 |
R-free | 0.21430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.569 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.385 | 1.690 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.105 | 0.869 |
Rmeas | 0.113 | 0.935 |
Number of reflections | 52701 | 2636 |
<I/σ(I)> | 13.2 | 2.2 |
Completeness [%] | 88.8 | 92.8 |
Redundancy | 6.9 | |
CC(1/2) | 0.998 | 0.777 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 0.2 M Ammonium sulfate 0.1 M MES pH 6.5, 30% w/v Polyethylene glycol 8000. Protein concentration 8.5 mg/ml. Cryo-protection by glycerol 20 % v/v. |