8QJL
SmNuc1 nuclease from Stenotrophomonas maltophilia
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | LIQUID ANODE |
Source details | Excillum MetalJet D2 70 kV |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-14 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.3418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 72.470, 72.970, 49.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.220 - 1.400 |
R-factor | 0.1228 |
Rwork | 0.119 |
R-free | 0.16120 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.692 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.220 | 1.420 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.118 | 1.166 |
Rmeas | 0.122 | 1.320 |
Number of reflections | 50815 | 2541 |
<I/σ(I)> | 19.9 | |
Completeness [%] | 96.0 | 98.1 |
Redundancy | 14.3 | 4.3 |
CC(1/2) | 0.999 | 0.509 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.2 M Lithium sulfate, 0.1 M BIS-TRIS pH 5.5, 25% w/v Polyethylene glycol 3,350. Protein concentration 7.5 mg/ml. Cryo-protection by glycerol 20 % v/v. |