8QJB
T6SS-linked Rhs repeat protein - Salmonella bongori Rhs-core domain extended N-terminus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9788 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 102.734, 118.733, 130.651 |
Unit cell angles | 90.00, 105.81, 90.00 |
Refinement procedure
Resolution | 47.500 - 3.090 |
R-factor | 0.1874 |
Rwork | 0.185 |
R-free | 0.22680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Rhs core domain |
RMSD bond length | 0.002 |
RMSD bond angle | 0.453 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.500 | 3.201 |
High resolution limit [Å] | 3.090 | 3.091 |
Rmerge | 0.122 | 0.600 |
Rmeas | 0.132 | 0.651 |
Rpim | 0.050 | 0.251 |
Number of reflections | 55140 | 5262 |
<I/σ(I)> | 15.16 | |
Completeness [%] | 99.4 | |
Redundancy | 6.857 | |
CC(1/2) | 0.997 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292.15 | Protein solution (1 ul, 4 mg/ml) was mixed with 1 ul reservoir solution (0.1 M MES pH 6.5, 30% ethylene glycol, 7% PEG 8,000) and 0.2 ul of JBScreen Plus compound B9 (2M sodium fluoride) |