8QJA
T6SS-linked Rhs repeat protein - Advenella mimigardefordensis VgrG-Rhs core
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-01 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 |
Unit cell lengths | 66.239, 97.783, 215.006 |
Unit cell angles | 85.69, 89.99, 76.89 |
Refinement procedure
Resolution | 48.480 - 3.360 |
R-factor | 0.2598 |
Rwork | 0.257 |
R-free | 0.31730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.568 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.480 | 3.480 |
High resolution limit [Å] | 3.360 | 3.360 |
Rmerge | 0.159 | 0.554 |
Rmeas | 0.187 | 0.652 |
Rpim | 0.098 | 0.341 |
Number of reflections | 70262 | 7161 |
<I/σ(I)> | 7.5 | |
Completeness [%] | 93.9 | 95.02 |
Redundancy | 3.52 | |
CC(1/2) | 0.986 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 292.15 | Protein solution (1 ul, 13.8 mg/ml) was mixed with 1 ul of mother liquor (0.1 M TRIS pH 8.5, 45% PEP426, 400 mM KCl) |