8QGB
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a di-adenosine derivative
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID14-4 |
| Synchrotron site | ESRF |
| Beamline | ID14-4 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-09-16 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 0.933400 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 62.820, 75.780, 118.830 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.104 - 2.270 |
| R-factor | 0.2095 |
| Rwork | 0.208 |
| R-free | 0.23620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.015 |
| RMSD bond angle | 0.807 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.890 | 2.340 |
| High resolution limit [Å] | 2.270 | 2.270 |
| Rmerge | 0.089 | 0.716 |
| Rmeas | 0.099 | 0.808 |
| Rpim | 0.043 | 0.366 |
| Total number of observations | 67319 | 5642 |
| Number of reflections | 12967 | 1202 |
| <I/σ(I)> | 14.5 | 2.1 |
| Completeness [%] | 96.3 | |
| Redundancy | 5.2 | 4.7 |
| CC(1/2) | 0.998 | 0.713 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 30 mM NaBr, 220 mM Kcitrate, glycerol 6%, 15-16% w/v PEG400 |






