8QE1
Crystal structure of human MAT2a bound to S-Adenosylmethionine and Compound 15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 68.422, 93.877, 116.609 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.290 - 1.095 |
R-factor | 0.1593 |
Rwork | 0.159 |
R-free | 0.16440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | AMoRE |
Refinement software | BUSTER (2.11.8 (24-FEB-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.294 | 1.138 |
High resolution limit [Å] | 1.095 | 1.096 |
Rmerge | 0.043 | 0.318 |
Rmeas | 0.047 | 0.386 |
Rpim | 0.018 | 0.214 |
Total number of observations | 20642 | |
Number of reflections | 137345 | 6863 |
<I/σ(I)> | 20 | 3.1 |
Completeness [%] | 89.7 | |
Redundancy | 6.1 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 8-12 % PEG 8000, 8-12 % ethylene glycol, 0.1 M Hepes pH 8.0 |