8QE0
Crystal structure of human MAT2a bound to S-Adenosylmethionine and Compound 12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97628 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 68.179, 93.984, 116.409 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.130 - 1.120 |
R-factor | 0.1709 |
Rwork | 0.170 |
R-free | 0.18670 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.000 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | AMoRE |
Refinement software | BUSTER (2.11.8 (24-FEB-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.130 | 1.227 |
High resolution limit [Å] | 1.120 | 1.125 |
Rmerge | 0.052 | 0.497 |
Rmeas | 0.057 | 0.639 |
Rpim | 0.023 | 0.395 |
Total number of observations | 10449 | |
Number of reflections | 95962 | 4797 |
<I/σ(I)> | 14 | 1.6 |
Completeness [%] | 68.0 | |
Redundancy | 5.8 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 8-12 % PEG 8000, 8-12 % ethylene glycol, 0.1 M Hepes pH 8.0 |