8QDZ
Crystal structure of human MAT2a bound to S-Adenosylmethionine and Compound 11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 67.827, 94.064, 116.532 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.620 - 1.160 |
R-factor | 0.1741 |
Rwork | 0.173 |
R-free | 0.18620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | AMoRE |
Refinement software | BUSTER (2.11.8 (24-FEB-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.620 | 1.251 |
High resolution limit [Å] | 1.160 | 1.160 |
Rmerge | 0.074 | 1.103 |
Number of reflections | 88119 | 4405 |
<I/σ(I)> | 11.4 | 1.6 |
Completeness [%] | 93.2 | 60.4 |
Redundancy | 6.4 | 5.4 |
CC(1/2) | 0.999 | 0.535 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 8-12 % PEG 8000, 8-12 % ethylene glycol, 0.1 M Hepes pH 8.0 |