8QAY
Medicago truncatula HISN5 (IGPD) in complex with MN, FMT, ACT, CIT, EDO, SO4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU PhotonJet-R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-30 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.5418 |
Spacegroup name | H 3 |
Unit cell lengths | 137.600, 137.600, 265.650 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.400 - 2.200 |
R-factor | 0.1895 |
Rwork | 0.189 |
R-free | 0.23140 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.929 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.000 | 2.260 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.192 | 1.110 |
Rmeas | 0.234 | 1.347 |
Number of reflections | 93797 | 6685 |
<I/σ(I)> | 5.72 | 1.22 |
Completeness [%] | 98.8 | 95 |
Redundancy | 2.99 | |
CC(1/2) | 0.986 | 0.470 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 0.1 M carboxylic acids (0.2 M sodium formate, 0.2 M ammonium acetate, 0.2M sodium citrate tribasic dihydrate, 0.2 M potassium sodium tartrate tetrahydrate, 0.2 M sodium oxamate); 1.0 M sodium HEPES, MOPS (acid), 40% glycerol, 20% w/v PEG 4000 |