8Q5T
Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, monoclinic crystalline form at 2.31-A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.74013 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.821, 83.984, 116.598 |
Unit cell angles | 90.00, 91.14, 90.00 |
Refinement procedure
Resolution | 48.470 - 2.310 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.874 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.140 | 2.350 |
High resolution limit [Å] | 2.310 | 2.310 |
Rmerge | 0.240 | 1.342 |
Rmeas | 0.255 | 1.460 |
Rpim | 0.085 | 0.566 |
Number of reflections | 45087 | 2223 |
<I/σ(I)> | 5.2 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.7 | 6.5 |
CC(1/2) | 0.990 | 0.517 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293.15 | The purified protein was crystallised at a final concentration of 6 mg/ml by spotting 0.5 ul of crystallisation solution with 0.5 ul of protein sample. Crystallisation was done anaerobically in a Coy tent containing a N2/H2 (97:3%) atmosphere. The screening was done at 20 degrees Celsius on 96-Well MRC 2-drop polystyrene (SWISSCI) plates containing 90 ul of crystallisation solution. The crystallisation solution in which crystals were obtained contained 30 % v/v 2-methyl-2,4-pentanediol, 100 mM sodium acetate, pH 4.6 and 20 mM calcium chloride. |