8Q5L
PqsR coinducer binding domain of Pseudomonas aeruginosa with ligand 2f: 2-(4-(3-((6-chloro-1-isopropyl-1H-benzo[d]imidazol-2-yl)amino)-2-hydroxypropoxy)phenyl)acetonitrile
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-09-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9686 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 121.121, 121.121, 115.534 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 105.110 - 2.900 |
R-factor | 0.22132 |
Rwork | 0.220 |
R-free | 0.25003 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.390 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 105.110 | 3.100 |
High resolution limit [Å] | 2.900 | 2.900 |
Number of reflections | 11410 | 1602 |
<I/σ(I)> | 10.1 | 2.2 |
Completeness [%] | 98.1 | |
Redundancy | 16.1 | |
CC(1/2) | 0.998 | 0.653 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1 M Trisodium citrate (pH range 5.8-6.2), 0.2 M Ammonium acetate and MPD (3-8%) |