8Q58
Crystal structure of metal-dependent classII sulfofructosephosphate aldolase (SFPA) from Hafnia paralvei HpSqiA-Zn
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-30 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9795 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 60.332, 88.490, 126.805 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.010 - 1.700 |
R-factor | 0.18623 |
Rwork | 0.185 |
R-free | 0.20052 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.658 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.400 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.062 | 0.810 |
Rmeas | 0.064 | 0.842 |
Rpim | 0.017 | 0.229 |
Total number of observations | 512681 | 26484 |
Number of reflections | 37727 | 1987 |
<I/σ(I)> | 20.2 | 3 |
Completeness [%] | 100.0 | |
Redundancy | 13.6 | 13.3 |
CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M sodium malonate dibasic monohydrate and 20% w/v PEG (polyethylene glycol) 3,350 |