8Q3J
Crystal structure of mIL-38 in complex with a neutralizing Fab e04 fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-24 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.800, 66.940, 129.050 |
Unit cell angles | 90.00, 104.73, 90.00 |
Refinement procedure
Resolution | 70.110 - 2.500 |
R-factor | 0.2328 |
Rwork | 0.227 |
R-free | 0.28260 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.108 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.110 | 2.490 |
High resolution limit [Å] | 2.350 | 2.350 |
Number of reflections | 50677 | 8129 |
<I/σ(I)> | 16.41 | |
Completeness [%] | 99.0 | 99.2 |
Redundancy | 6.4 | |
CC(1/2) | 0.990 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 281 | 27.5% (w/v) PEG 1500 100 mM SPG buffer, pH 8.7 |