8Q2M
18mer DNA mimic Foldamer with an Aliphatic linker in complex with Sac7d V26A/M29A protein
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 70.920, 70.920, 119.290 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.710 - 3.210 |
R-factor | 0.326 |
Rwork | 0.325 |
R-free | 0.33450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.026 |
RMSD bond angle | 4.123 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.710 | 3.320 |
High resolution limit [Å] | 3.210 | 3.210 |
Number of reflections | 3226 | 310 |
<I/σ(I)> | 23.56 | 3.51 |
Completeness [%] | 99.5 | 100 |
Redundancy | 37.1 | 39.9 |
CC(1/2) | 1.000 | 0.952 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 9 % PEG 400, 0.1 M MES pH 6.0 |