8Q1O
S-layer protein SlpA from Lactobacillus amylovorus, domain I (aa 32-209), important for Self-assembly
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.004700 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 133.194, 43.854, 86.384 |
Unit cell angles | 90.00, 95.50, 90.00 |
Refinement procedure
Resolution | 42.993 - 3.401 |
Rwork | 0.251 |
R-free | 0.33060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 1.223 |
Data reduction software | XDS |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.993 | 42.990 | 3.670 |
High resolution limit [Å] | 3.400 | 9.000 | 3.400 |
Rmerge | 0.201 | 0.054 | 0.643 |
Rmeas | 0.278 | 0.076 | 0.883 |
Rpim | 0.191 | 0.053 | 0.603 |
Number of reflections | 7031 | 408 | 1431 |
<I/σ(I)> | 5.2 | ||
Completeness [%] | 99.3 | ||
Redundancy | 3.3 | 3 | 3.4 |
CC(1/2) | 0.985 | 0.997 | 0.854 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | Protein stock solution of 15 mg/mL in 20 mM Hepes pH 8 and 100 mM NaCl; Condition: 1.0 M Ammonium formate, 0.1 M Sodium acetate pH 5.0, 8 % w/v PGA with protein end concentration of 7.5 mg/mL corresponding to 50% of protein solution in the 1.0 uL drop |