8Q1D
D10N variant of beta-phosphoglucomutase from Lactococcus lactis in complex with fructose 1,6-bisphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-17 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 31.888, 71.382, 83.909 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.429 - 1.750 |
Rwork | 0.161 |
R-free | 0.25200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.567 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.429 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.151 | 1.330 |
Rpim | 0.043 | 0.379 |
Number of reflections | 20093 | 1013 |
<I/σ(I)> | 10.5 | 1.1 |
Completeness [%] | 100.0 | 99.2 |
Redundancy | 13.1 | 13 |
CC(1/2) | 0.998 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 290 | 0.6 mM bPGM-D10N 5 mM MgCl2 50 mM fructose 1,6-bisphosphate 38 % PEG 4000 200 mM sodium acetate 100 mM tris |